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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871965.1_cds_XP_016434625.1_30662
CDS Infomation

[gene=LOC107760986] [db_xref=GeneID:107760986] [protein=beta-carotene isomerase D27, chloroplastic-like isoform X2] [protein_id=XP_016434625.1] [location=complement(join(52619..52663,52857..52945,53678..53784,53940..54001,54562..54654,55459..55598,55666..55918))] [gbkey=CDS]
Sequence

ATGGAAGCAAATCTTGTTCAACCCTACCATAGCTTTTCAACAGTATCCATGAGAAACAGA
AATAAGATCAATACTTATAAATACAAAAATATACCATATCCACTATGCTCCATATTAACG
AAGCCACCTGCAAATAATCAAAATCATAATGCAGAAACAACCACAGGCAGTTCTTCCAAT
AATGTTTACAAAGATAATTGGTTCGATCGTCTCGCCATTAATCATCTCTCTCAAAGTATA
CAAGCTACCACAGGATTAAGAAACAATAAGAGTGGATATGAAGGCTTGGCGGAGGCTGCA
AAGATGGTATATACCAACTTTAACTCAACGCGTCAAGTAAATCTTGTTGTTGAAGCTCTT
CAAAAGGCATTCCCTAAGCCTATTCTTTCCCTGATGAAGATGGTACTACCACAATCTAAG
TGGGCAAGAGAGTATTGCGCTGCTTTCACCAGAGTCTTCTTCTCTTGGCTAGTGGGACCC
TGTGAGGTGAAAGAGTCAGAATTTAACGGGAGAAAGGAAAACAATGTGGTCCACATCAAA
AAATGCAGGTTTCTGGAGGAAACCAATTGCGTGGGAATGTGCACTAACCTCTGCAAGATG
CCTTCTCAATTGTTCATCAAGGATACATTAGGAATGCCAGTGAACATGGTACCAAACTTT
GATGATATGAGCTGTGAGATGATATTTGGACAGGATGCTCCCCCACCAGATACAGATCCA
GCATTTGTGCAGCCATGCTACAAAGCAAACTTGGCAATAAACACCAACAGGATTGCAACA
GTCAAATGA

Peptide Sequence

PEP ID

XP_016434625.1
PEP Infomation

PREDICTED: beta-carotene isomerase D27, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MEANLVQPYHSFSTVSMRNRNKINTYKYKNIPYPLCSILTKPPANNQNHNAETTTGSSSN
NVYKDNWFDRLAINHLSQSIQATTGLRNNKSGYEGLAEAAKMVYTNFNSTRQVNLVVEAL
QKAFPKPILSLMKMVLPQSKWAREYCAAFTRVFFSWLVGPCEVKESEFNGRKENNVVHIK
KCRFLEETNCVGMCTNLCKMPSQLFIKDTLGMPVNMVPNFDDMSCEMIFGQDAPPPDTDP
AFVQPCYKANLAINTNRIATVK

Transcript Sequence

Gene sequence data has not been registered.